Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
GPC4O75487 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 AL133373.2-201ENST00000623187 2828 ntBASIC18.44■□□□□ 0.54
GPC4O75487 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.44■□□□□ 0.54
GPC4O75487 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC4O75487 RCC2P3-201ENST00000418112 1537 ntBASIC18.44■□□□□ 0.54
GPC4O75487 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GPC4O75487 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
GPC4O75487 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
GPC4O75487 AL023284.2-201ENST00000405850 579 ntBASIC18.43■□□□□ 0.54
GPC4O75487 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 AC087499.1-201ENST00000418141 1075 ntBASIC18.43■□□□□ 0.54
GPC4O75487 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.43■□□□□ 0.54
GPC4O75487 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.43■□□□□ 0.54
GPC4O75487 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.43■□□□□ 0.54
GPC4O75487 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.43■□□□□ 0.54
GPC4O75487 GPAT2P1-201ENST00000444924 1672 ntBASIC18.43■□□□□ 0.54
GPC4O75487 AL109659.2-201ENST00000606809 1674 ntBASIC18.43■□□□□ 0.54
GPC4O75487 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
GPC4O75487 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GPC4O75487 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.43■□□□□ 0.54
GPC4O75487 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.43■□□□□ 0.54
GPC4O75487 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
GPC4O75487 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
GPC4O75487 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.42■□□□□ 0.54
GPC4O75487 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
GPC4O75487 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GPC4O75487 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.42■□□□□ 0.54
GPC4O75487 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 INGX-201ENST00000359239 846 ntBASIC18.42■□□□□ 0.54
GPC4O75487 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 AP003041.3-201ENST00000527151 707 ntBASIC18.42■□□□□ 0.54
GPC4O75487 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.42■□□□□ 0.54
GPC4O75487 MIR4674-201ENST00000582457 87 ntBASIC18.42■□□□□ 0.54
GPC4O75487 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 AC010653.2-201ENST00000623505 997 ntBASIC18.42■□□□□ 0.54
GPC4O75487 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GPC4O75487 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 MTMR9LP-203ENST00000426597 1545 ntBASIC18.42■□□□□ 0.54
GPC4O75487 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.42■□□□□ 0.54
GPC4O75487 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.42■□□□□ 0.54
GPC4O75487 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GPC4O75487 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
GPC4O75487 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.41■□□□□ 0.54
GPC4O75487 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GPC4O75487 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms