Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 KRT8P7-201ENST00000533003 1432 ntBASIC16.57■□□□□ 0.24
PTP4A3O75365 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 MIR149-201ENST00000384879 89 ntBASIC16.57■□□□□ 0.24
PTP4A3O75365 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.57■□□□□ 0.24
PTP4A3O75365 AL353719.1-201ENST00000566847 864 ntBASIC16.57■□□□□ 0.24
PTP4A3O75365 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.57■□□□□ 0.24
PTP4A3O75365 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.57■□□□□ 0.24
PTP4A3O75365 Z99916.2-201ENST00000604037 246 ntBASIC16.57■□□□□ 0.24
PTP4A3O75365 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTP4A3O75365 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTP4A3O75365 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.57■□□□□ 0.24
PTP4A3O75365 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 AC009102.3-201ENST00000623118 1491 ntBASIC16.56■□□□□ 0.24
PTP4A3O75365 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTP4A3O75365 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.56■□□□□ 0.24
PTP4A3O75365 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 LINC00896-202ENST00000609602 2128 ntBASIC16.56■□□□□ 0.24
PTP4A3O75365 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PTP4A3O75365 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A3O75365 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.56■□□□□ 0.24
PTP4A3O75365 AL356309.3-201ENST00000624132 1934 ntBASIC16.56■□□□□ 0.24
PTP4A3O75365 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.56■□□□□ 0.24
PTP4A3O75365 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A3O75365 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 AC099343.3-201ENST00000605834 2503 ntBASIC16.55■□□□□ 0.24
PTP4A3O75365 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTP4A3O75365 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 SLC25A1P2-201ENST00000430693 912 ntBASIC16.55■□□□□ 0.24
PTP4A3O75365 TSPY17P-201ENST00000450329 467 ntBASIC16.55■□□□□ 0.24
PTP4A3O75365 AP003041.3-201ENST00000527151 707 ntBASIC16.55■□□□□ 0.24
PTP4A3O75365 WWOX-216ENST00000569818 525 ntBASIC16.55■□□□□ 0.24
PTP4A3O75365 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.55■□□□□ 0.24
PTP4A3O75365 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A3O75365 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTP4A3O75365 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A3O75365 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms