Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF253O75346 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF253O75346 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF253O75346 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
ZNF253O75346 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF253O75346 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF253O75346 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF253O75346 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF253O75346 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF253O75346 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF253O75346 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF253O75346 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF253O75346 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.33□□□□□ -0.11
ZNF253O75346 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 ESPNP-201ENST00000270691 2015 ntBASIC14.33□□□□□ -0.12
ZNF253O75346 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ZNF253O75346 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF253O75346 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF253O75346 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF253O75346 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF253O75346 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF253O75346 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF253O75346 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.33□□□□□ -0.12
ZNF253O75346 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
ZNF253O75346 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF253O75346 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF253O75346 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF253O75346 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF253O75346 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF253O75346 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ZNF253O75346 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZNF253O75346 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.32□□□□□ -0.12
ZNF253O75346 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.32□□□□□ -0.12
ZNF253O75346 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF253O75346 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF253O75346 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
ZNF253O75346 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.32□□□□□ -0.12
ZNF253O75346 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ZNF253O75346 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ZNF253O75346 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF253O75346 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms