Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT3O75175 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT3O75175 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.82■□□□□ 0.44
CNOT3O75175 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 AC009947.2-201ENST00000444014 672 ntBASIC17.82■□□□□ 0.44
CNOT3O75175 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT3O75175 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.82■□□□□ 0.44
CNOT3O75175 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.82■□□□□ 0.44
CNOT3O75175 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.82■□□□□ 0.44
CNOT3O75175 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.82■□□□□ 0.44
CNOT3O75175 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CNOT3O75175 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CNOT3O75175 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CNOT3O75175 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 AC012313.1-201ENST00000593393 3059 ntBASIC17.82■□□□□ 0.44
CNOT3O75175 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT3O75175 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT3O75175 AL390961.4-201ENST00000623958 2535 ntBASIC17.81■□□□□ 0.44
CNOT3O75175 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.81■□□□□ 0.44
CNOT3O75175 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.81■□□□□ 0.44
CNOT3O75175 AL031133.1-201ENST00000406807 723 ntBASIC17.81■□□□□ 0.44
CNOT3O75175 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.81■□□□□ 0.44
CNOT3O75175 KRT18P38-201ENST00000449496 1282 ntBASIC17.81■□□□□ 0.44
CNOT3O75175 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CNOT3O75175 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CNOT3O75175 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNOT3O75175 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT3O75175 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 TEX21P-204ENST00000641479 1693 ntBASIC17.8■□□□□ 0.44
CNOT3O75175 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT3O75175 PKD1P1-201ENST00000458669 6805 ntBASIC17.8■□□□□ 0.44
CNOT3O75175 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT3O75175 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNOT3O75175 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT3O75175 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CNOT3O75175 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.8■□□□□ 0.44
CNOT3O75175 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 CR769767.2-201ENST00000622735 460 ntBASIC17.8■□□□□ 0.44
CNOT3O75175 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms