Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 AL024508.2-201ENST00000607749 1894 ntBASIC17.69■□□□□ 0.42
PRAMEF4O60810 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF4O60810 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 AL096828.2-201ENST00000567259 1965 ntBASIC17.68■□□□□ 0.42
PRAMEF4O60810 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.68■□□□□ 0.42
PRAMEF4O60810 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 NEK4P2-201ENST00000580004 1012 ntBASIC17.68■□□□□ 0.42
PRAMEF4O60810 MIR3180-4-201ENST00000582223 153 ntBASIC17.68■□□□□ 0.42
PRAMEF4O60810 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
PRAMEF4O60810 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF4O60810 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 AC068880.1-201ENST00000507289 2297 ntBASIC17.68■□□□□ 0.42
PRAMEF4O60810 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF4O60810 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 AC073508.3-201ENST00000619697 1419 ntBASIC17.67■□□□□ 0.42
PRAMEF4O60810 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF4O60810 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF4O60810 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms