Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 AC026396.1-201ENST00000419388 421 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 AL645929.1-201ENST00000420084 975 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.2■□□□□ 0.5
NOBOXO60393 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.2■□□□□ 0.5
NOBOXO60393 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NOBOXO60393 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.2■□□□□ 0.5
NOBOXO60393 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 AC079602.3-201ENST00000623931 403 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.2■□□□□ 0.5
NOBOXO60393 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.2■□□□□ 0.5
NOBOXO60393 AL157888.1-201ENST00000631930 593 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 AC141586.3-201ENST00000562166 1838 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NOBOXO60393 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
NOBOXO60393 AC009113.1-201ENST00000570267 2443 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NOBOXO60393 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOBOXO60393 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
NOBOXO60393 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.2■□□□□ 0.5
NOBOXO60393 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.2■□□□□ 0.5
NOBOXO60393 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NOBOXO60393 KRT8P32-201ENST00000512863 1461 ntBASIC18.2■□□□□ 0.5
NOBOXO60393 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
NOBOXO60393 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.19■□□□□ 0.5
NOBOXO60393 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.19■□□□□ 0.5
NOBOXO60393 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.19■□□□□ 0.5
NOBOXO60393 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.19■□□□□ 0.5
NOBOXO60393 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.19■□□□□ 0.5
NOBOXO60393 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.19■□□□□ 0.5
NOBOXO60393 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NOBOXO60393 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NOBOXO60393 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.19■□□□□ 0.5
NOBOXO60393 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOBOXO60393 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.18■□□□□ 0.5
NOBOXO60393 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NOBOXO60393 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NOBOXO60393 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.18■□□□□ 0.5
NOBOXO60393 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 HCG4P8-203ENST00000443049 980 ntBASIC18.18■□□□□ 0.5
NOBOXO60393 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.18■□□□□ 0.5
NOBOXO60393 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
NOBOXO60393 MIR3917-201ENST00000580971 93 ntBASIC18.18■□□□□ 0.5
NOBOXO60393 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.18■□□□□ 0.5
NOBOXO60393 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 FP475955.4-201ENST00000623131 1990 ntBASIC18.18■□□□□ 0.5
NOBOXO60393 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOBOXO60393 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms