Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
LCMT2O60294 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LCMT2O60294 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LCMT2O60294 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.58■□□□□ 0.41
LCMT2O60294 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LCMT2O60294 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LCMT2O60294 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
LCMT2O60294 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LCMT2O60294 FAM8A6P-201ENST00000407496 1135 ntBASIC17.58■□□□□ 0.4
LCMT2O60294 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 HOMER2P1-201ENST00000455653 964 ntBASIC17.58■□□□□ 0.4
LCMT2O60294 AC092597.1-201ENST00000487352 616 ntBASIC17.58■□□□□ 0.4
LCMT2O60294 AC022616.7-201ENST00000525383 220 ntBASIC17.58■□□□□ 0.4
LCMT2O60294 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.58■□□□□ 0.4
LCMT2O60294 AL049597.2-201ENST00000565575 961 ntBASIC17.58■□□□□ 0.4
LCMT2O60294 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.58■□□□□ 0.4
LCMT2O60294 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LCMT2O60294 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.58■□□□□ 0.4
LCMT2O60294 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.58■□□□□ 0.4
LCMT2O60294 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LCMT2O60294 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.57■□□□□ 0.4
LCMT2O60294 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LCMT2O60294 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.57■□□□□ 0.4
LCMT2O60294 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LCMT2O60294 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.57■□□□□ 0.4
LCMT2O60294 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.57■□□□□ 0.4
LCMT2O60294 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.57■□□□□ 0.4
LCMT2O60294 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.57■□□□□ 0.4
LCMT2O60294 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.57■□□□□ 0.4
LCMT2O60294 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 AC009065.1-201ENST00000564055 1225 ntBASIC17.57■□□□□ 0.4
LCMT2O60294 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.57■□□□□ 0.4
LCMT2O60294 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.57■□□□□ 0.4
LCMT2O60294 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.57■□□□□ 0.4
LCMT2O60294 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCMT2O60294 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.57■□□□□ 0.4
LCMT2O60294 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.56■□□□□ 0.4
LCMT2O60294 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LCMT2O60294 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.56■□□□□ 0.4
LCMT2O60294 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 PVRIG2P-201ENST00000435460 978 ntBASIC17.56■□□□□ 0.4
LCMT2O60294 AC112907.2-201ENST00000448639 330 ntBASIC17.56■□□□□ 0.4
LCMT2O60294 AC092647.4-201ENST00000457211 535 ntBASIC17.56■□□□□ 0.4
LCMT2O60294 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.56■□□□□ 0.4
LCMT2O60294 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.56■□□□□ 0.4
LCMT2O60294 HYMAI.1-201ENST00000620949 238 ntBASIC17.56■□□□□ 0.4
LCMT2O60294 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.56■□□□□ 0.4
LCMT2O60294 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LCMT2O60294 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.56■□□□□ 0.4
LCMT2O60294 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
LCMT2O60294 AC135776.1-201ENST00000319817 2481 ntBASIC17.56■□□□□ 0.4
LCMT2O60294 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCMT2O60294 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.56■□□□□ 0.4
LCMT2O60294 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms