Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.68■□□□□ 0.1
SSNA1O43805 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.68■□□□□ 0.1
SSNA1O43805 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.68■□□□□ 0.1
SSNA1O43805 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SSNA1O43805 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.68■□□□□ 0.1
SSNA1O43805 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.68■□□□□ 0.1
SSNA1O43805 MYC-208ENST00000641036 567 ntBASIC15.68■□□□□ 0.1
SSNA1O43805 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.68■□□□□ 0.1
SSNA1O43805 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 PCDH8P1-201ENST00000428983 2773 ntBASIC15.67■□□□□ 0.1
SSNA1O43805 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 MCRIP2P1-201ENST00000394346 511 ntBASIC15.67■□□□□ 0.1
SSNA1O43805 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.67■□□□□ 0.1
SSNA1O43805 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.67■□□□□ 0.1
SSNA1O43805 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SSNA1O43805 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.67■□□□□ 0.1
SSNA1O43805 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSNA1O43805 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SSNA1O43805 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.66■□□□□ 0.1
SSNA1O43805 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.66■□□□□ 0.1
SSNA1O43805 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.66■□□□□ 0.1
SSNA1O43805 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSNA1O43805 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.66■□□□□ 0.1
SSNA1O43805 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.66■□□□□ 0.1
SSNA1O43805 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms