Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.6□□□□□ -0.39
NDUFA1O15239 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NDUFA1O15239 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.6□□□□□ -0.39
NDUFA1O15239 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
NDUFA1O15239 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 FLJ13224-201ENST00000313737 1514 ntBASIC12.59□□□□□ -0.39
NDUFA1O15239 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.59□□□□□ -0.39
NDUFA1O15239 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.59□□□□□ -0.39
NDUFA1O15239 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.59□□□□□ -0.39
NDUFA1O15239 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.59□□□□□ -0.39
NDUFA1O15239 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 AL499627.1-201ENST00000569373 2188 ntBASIC12.59□□□□□ -0.39
NDUFA1O15239 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
NDUFA1O15239 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFA1O15239 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFA1O15239 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
NDUFA1O15239 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.58□□□□□ -0.39
NDUFA1O15239 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
NDUFA1O15239 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NDUFA1O15239 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFA1O15239 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
NDUFA1O15239 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFA1O15239 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFA1O15239 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.58□□□□□ -0.4
NDUFA1O15239 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFA1O15239 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFA1O15239 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NDUFA1O15239 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFA1O15239 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFA1O15239 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFA1O15239 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NDUFA1O15239 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms