Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.49■□□□□ 0.71
SOX1O00570 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.48■□□□□ 0.71
SOX1O00570 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.48■□□□□ 0.71
SOX1O00570 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 RNA5SP421-201ENST00000516864 134 ntBASIC19.48■□□□□ 0.71
SOX1O00570 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.48■□□□□ 0.71
SOX1O00570 AC025678.2-201ENST00000562061 970 ntBASIC19.48■□□□□ 0.71
SOX1O00570 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 RN7SL204P-201ENST00000582831 262 ntBASIC19.48■□□□□ 0.71
SOX1O00570 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.48■□□□□ 0.71
SOX1O00570 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.48■□□□□ 0.71
SOX1O00570 MIR6752-201ENST00000618442 71 ntBASIC19.48■□□□□ 0.71
SOX1O00570 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 LINC00565-201ENST00000562710 2331 ntBASIC19.48■□□□□ 0.71
SOX1O00570 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SOX1O00570 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX1O00570 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.47■□□□□ 0.71
SOX1O00570 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SOX1O00570 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SOX1O00570 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SOX1O00570 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.47■□□□□ 0.71
SOX1O00570 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.47■□□□□ 0.71
SOX1O00570 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 AC136632.2-201ENST00000512891 861 ntBASIC19.47■□□□□ 0.71
SOX1O00570 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.47■□□□□ 0.71
SOX1O00570 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SOX1O00570 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SOX1O00570 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX1O00570 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SOX1O00570 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SOX1O00570 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.46■□□□□ 0.71
SOX1O00570 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SOX1O00570 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.46■□□□□ 0.71
SOX1O00570 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.46■□□□□ 0.71
SOX1O00570 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.46■□□□□ 0.71
SOX1O00570 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 INGX-202ENST00000489074 768 ntBASIC19.46■□□□□ 0.71
SOX1O00570 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.46■□□□□ 0.71
SOX1O00570 AP005018.1-201ENST00000525475 301 ntBASIC19.46■□□□□ 0.71
SOX1O00570 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 DUX4L27-201ENST00000554796 1261 ntBASIC19.46■□□□□ 0.71
SOX1O00570 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.46■□□□□ 0.71
SOX1O00570 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.46■□□□□ 0.71
SOX1O00570 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 AC004835.2-201ENST00000603762 682 ntBASIC19.46■□□□□ 0.71
SOX1O00570 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.46■□□□□ 0.71
SOX1O00570 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms