Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.2■□□□□ 0.5
TLR4O00206 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 AC120498.9-201ENST00000339021 3867 ntBASIC18.2■□□□□ 0.5
TLR4O00206 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR4O00206 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 AC233702.3-201ENST00000578656 1387 ntBASIC18.19■□□□□ 0.5
TLR4O00206 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.19■□□□□ 0.5
TLR4O00206 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR4O00206 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR4O00206 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.19■□□□□ 0.5
TLR4O00206 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.19■□□□□ 0.5
TLR4O00206 AC074051.2-201ENST00000565115 352 ntBASIC18.19■□□□□ 0.5
TLR4O00206 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.19■□□□□ 0.5
TLR4O00206 Z69720.1-201ENST00000601483 472 ntBASIC18.19■□□□□ 0.5
TLR4O00206 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.19■□□□□ 0.5
TLR4O00206 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TLR4O00206 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 AC138932.1-201ENST00000534164 6830 ntBASIC18.19■□□□□ 0.5
TLR4O00206 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR4O00206 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR4O00206 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR4O00206 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.18■□□□□ 0.5
TLR4O00206 AC124864.1-201ENST00000623408 392 ntBASIC18.18■□□□□ 0.5
TLR4O00206 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 AL357033.4-201ENST00000617703 1807 ntBASIC18.18■□□□□ 0.5
TLR4O00206 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TLR4O00206 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR4O00206 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TLR4O00206 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR4O00206 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TLR4O00206 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.17■□□□□ 0.5
TLR4O00206 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TLR4O00206 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.17■□□□□ 0.5
TLR4O00206 LINC00167-201ENST00000530583 1419 ntBASIC18.17■□□□□ 0.5
TLR4O00206 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TLR4O00206 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.17■□□□□ 0.5
TLR4O00206 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.17■□□□□ 0.5
TLR4O00206 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.17■□□□□ 0.5
TLR4O00206 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 HEIH-201ENST00000623091 1652 ntBASIC18.17■□□□□ 0.5
TLR4O00206 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.17■□□□□ 0.5
TLR4O00206 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
TLR4O00206 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.17■□□□□ 0.5
TLR4O00206 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TLR4O00206 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR4O00206 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.16■□□□□ 0.5
TLR4O00206 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.16■□□□□ 0.5
TLR4O00206 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 KRT89P-201ENST00000620027 1478 ntBASIC18.16■□□□□ 0.5
TLR4O00206 AL032819.2-201ENST00000624543 2162 ntBASIC18.16■□□□□ 0.5
TLR4O00206 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TLR4O00206 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms