Protein–RNA interactions for Protein: J3QQQ9

Uncharacterized protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QQQ9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
J3QQQ9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 YBX1P10-201ENST00000444752 975 ntBASIC12.68□□□□□ -0.38
J3QQQ9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
J3QQQ9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 AL589743.5-201ENST00000616611 1050 ntBASIC12.68□□□□□ -0.38
J3QQQ9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
J3QQQ9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.68□□□□□ -0.38
J3QQQ9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
J3QQQ9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.68□□□□□ -0.38
J3QQQ9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.68□□□□□ -0.38
J3QQQ9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
J3QQQ9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.67□□□□□ -0.38
J3QQQ9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.67□□□□□ -0.38
J3QQQ9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.67□□□□□ -0.38
J3QQQ9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.67□□□□□ -0.38
J3QQQ9 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.67□□□□□ -0.38
J3QQQ9 AC096631.2-201ENST00000436136 790 ntBASIC12.67□□□□□ -0.38
J3QQQ9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.67□□□□□ -0.38
J3QQQ9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
J3QQQ9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
J3QQQ9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
J3QQQ9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.67□□□□□ -0.38
J3QQQ9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.67□□□□□ -0.38
J3QQQ9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
J3QQQ9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
J3QQQ9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.67□□□□□ -0.38
J3QQQ9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.67□□□□□ -0.38
J3QQQ9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
J3QQQ9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.66□□□□□ -0.38
J3QQQ9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.66□□□□□ -0.38
J3QQQ9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
J3QQQ9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
J3QQQ9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
J3QQQ9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.66□□□□□ -0.38
J3QQQ9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.66□□□□□ -0.38
J3QQQ9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.66□□□□□ -0.38
J3QQQ9 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.66□□□□□ -0.38
J3QQQ9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms