Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 AL596257.1-201ENST00000641463 2694 ntBASIC19.91■□□□□ 0.78
CCDC66A2RUB6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 AC073592.3-201ENST00000625118 1834 ntBASIC19.91■□□□□ 0.78
CCDC66A2RUB6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 AC008403.3-201ENST00000598924 454 ntBASIC19.91■□□□□ 0.78
CCDC66A2RUB6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC66A2RUB6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC66A2RUB6 CICP6-201ENST00000457191 2729 ntBASIC19.89■□□□□ 0.78
CCDC66A2RUB6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC66A2RUB6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC66A2RUB6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCDC66A2RUB6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 AC008764.6-201ENST00000595909 2069 ntBASIC19.89■□□□□ 0.77
CCDC66A2RUB6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC66A2RUB6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms