Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC78A2IDD5 LETM1P2-201ENST00000597330 2178 ntBASIC18.65■□□□□ 0.58
CCDC78A2IDD5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC78A2IDD5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC78A2IDD5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC78A2IDD5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC78A2IDD5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC78A2IDD5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC78A2IDD5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 AL353719.1-201ENST00000566847 864 ntBASIC18.64■□□□□ 0.57
CCDC78A2IDD5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC78A2IDD5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 SLC25A1P2-201ENST00000430693 912 ntBASIC18.63■□□□□ 0.57
CCDC78A2IDD5 AC007663.1-201ENST00000438948 1240 ntBASIC18.63■□□□□ 0.57
CCDC78A2IDD5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 CCR12P-201ENST00000446203 998 ntBASIC18.63■□□□□ 0.57
CCDC78A2IDD5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 CR769767.2-201ENST00000622735 460 ntBASIC18.63■□□□□ 0.57
CCDC78A2IDD5 AC010947.1-201ENST00000623454 693 ntBASIC18.63■□□□□ 0.57
CCDC78A2IDD5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 AC092338.2-201ENST00000568827 1415 ntBASIC18.63■□□□□ 0.57
CCDC78A2IDD5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC78A2IDD5 ESPNP-201ENST00000270691 2015 ntBASIC18.62■□□□□ 0.57
CCDC78A2IDD5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 MMP23A-201ENST00000234610 1017 ntBASIC18.62■□□□□ 0.57
CCDC78A2IDD5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 TSPY17P-201ENST00000450329 467 ntBASIC18.62■□□□□ 0.57
CCDC78A2IDD5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
CCDC78A2IDD5 AC116562.4-202ENST00000641738 218 ntBASIC18.62■□□□□ 0.57
CCDC78A2IDD5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 AC034236.2-201ENST00000606662 1610 ntBASIC18.62■□□□□ 0.57
CCDC78A2IDD5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC78A2IDD5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 KRT8P50-201ENST00000562022 1438 ntBASIC18.61■□□□□ 0.57
CCDC78A2IDD5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC78A2IDD5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms