Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV7S3A2A0A539 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 TSPY7P-201ENST00000431358 1114 ntBASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 RBM17P1-201ENST00000453646 1190 ntBASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV7S3A2A0A539 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 FLJ13224-201ENST00000313737 1514 ntBASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 AL390955.1-201ENST00000428694 934 ntBASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 CR769767.2-201ENST00000622735 460 ntBASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 GNAS-203ENST00000306120 1878 ntBASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TCRBV7S3A2A0A539 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 SLC25A6P5-201ENST00000435663 894 ntBASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 AL353719.1-201ENST00000566847 864 ntBASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 AP000525.1-201ENST00000608286 694 ntBASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms