Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV19A0A0A6YYK7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 KRT18P31-201ENST00000506277 1292 ntBASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 AC113404.2-201ENST00000507884 177 ntBASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV19A0A0A6YYK7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 AC246785.2-201ENST00000432512 513 ntBASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 SDHAP2-201ENST00000455183 2001 ntBASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV19A0A0A6YYK7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 IGHV3-47-201ENST00000425060 335 ntBASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 AC099343.3-201ENST00000605834 2503 ntBASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV19A0A0A6YYK7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 NSUN5P1-202ENST00000421140 1535 ntBASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 NSUN5P2-203ENST00000457352 1529 ntBASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV19A0A0A6YYK7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms