Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 KRT8P50-201ENST00000562022 1438 ntBASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 LETM1P2-201ENST00000597330 2178 ntBASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 RN7SL606P-201ENST00000472779 293 ntBASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 AL357033.4-201ENST00000617703 1807 ntBASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSNK1G3Q9Y6M4 AC120498.9-201ENST00000339021 3867 ntBASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 KRT18P31-201ENST00000506277 1292 ntBASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSNK1G3Q9Y6M4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 AL353692.3-201ENST00000407031 1396 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 VENTXP7-201ENST00000475503 772 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 FOSL1P1-201ENST00000511041 816 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 AC074051.2-201ENST00000565115 352 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 AL732292.2-201ENST00000609649 430 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 AL592071.1-201ENST00000611956 408 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 KRT8P10-201ENST00000450021 1447 ntBASIC17.97■□□□□ 0.47
CSNK1G3Q9Y6M4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms