Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 AC092597.1-201ENST00000487352 616 ntBASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 SDHAP1-207ENST00000440850 2000 ntBASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 MCCD1P1-208ENST00000445732 328 ntBASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 AC011498.5-201ENST00000592027 486 ntBASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 AC024243.1-201ENST00000609234 778 ntBASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA3Q9Y5H0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 AL121672.3-201ENST00000608644 468 ntBASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 AC036111.1-201ENST00000533973 1582 ntBASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA3Q9Y5H0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA3Q9Y5H0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms