Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 AC008040.2-201ENST00000461049 708 ntBASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 NAPSB-206ENST00000562112 1266 ntBASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 MYC-208ENST00000641036 567 ntBASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB3Q9Y5G1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 MESTP1-201ENST00000404287 994 ntBASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 MIR1238-201ENST00000408483 83 ntBASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 AC126763.1-201ENST00000552015 2118 ntBASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 AC096733.2-201ENST00000609937 1394 ntBASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 AP000997.3-201ENST00000623333 2250 ntBASIC17.49■□□□□ 0.39
PCDHGB3Q9Y5G1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 KRT18P22-201ENST00000402024 1347 ntBASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 SLC25A1P4-201ENST00000567977 778 ntBASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 AC068587.9-201ENST00000641814 219 ntBASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 OR6D1P-202ENST00000641007 5290 ntBASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGB3Q9Y5G1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGB3Q9Y5G1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms