Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 AL121772.3-201ENST00000610840 674 ntBASIC25.09■■□□□ 1.61
NINLQ9Y2I6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.09■■□□□ 1.61
NINLQ9Y2I6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 LINC00167-201ENST00000530583 1419 ntBASIC25.08■■□□□ 1.61
NINLQ9Y2I6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NINLQ9Y2I6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 CCS-201ENST00000310190 942 ntTSL 5 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 NSUN5P1-202ENST00000421140 1535 ntBASIC25.07■■□□□ 1.6
NINLQ9Y2I6 NSUN5P2-203ENST00000457352 1529 ntBASIC25.07■■□□□ 1.6
NINLQ9Y2I6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NINLQ9Y2I6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 AC091607.1-201ENST00000490318 1060 ntBASIC25.06■■□□□ 1.6
NINLQ9Y2I6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 ABR-217ENST00000572441 563 ntTSL 4 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 AL732292.2-201ENST00000609649 430 ntBASIC25.06■■□□□ 1.6
NINLQ9Y2I6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NINLQ9Y2I6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 KRT18P31-201ENST00000506277 1292 ntBASIC25.05■■□□□ 1.6
NINLQ9Y2I6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 AC009154.2-201ENST00000621177 724 ntBASIC25.05■■□□□ 1.6
NINLQ9Y2I6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 LINC01126-201ENST00000623515 1646 ntBASIC25.05■■□□□ 1.6
NINLQ9Y2I6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms