Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
FOXA2Q9Y261 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.92□□□□□ -0.02
FOXA2Q9Y261 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXA2Q9Y261 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXA2Q9Y261 AC008556.1-201ENST00000610908 2040 ntBASIC14.92□□□□□ -0.02
FOXA2Q9Y261 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXA2Q9Y261 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.92□□□□□ -0.02
FOXA2Q9Y261 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 AC093677.2-201ENST00000600169 1863 ntBASIC14.91□□□□□ -0.02
FOXA2Q9Y261 AL109659.2-201ENST00000606809 1674 ntBASIC14.91□□□□□ -0.02
FOXA2Q9Y261 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
FOXA2Q9Y261 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 MMP23A-201ENST00000234610 1017 ntBASIC14.9□□□□□ -0.02
FOXA2Q9Y261 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 BX088651.1-201ENST00000540551 451 ntBASIC14.9□□□□□ -0.02
FOXA2Q9Y261 C2orf69P3-201ENST00000565542 1120 ntBASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXA2Q9Y261 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms