Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 AC133552.2-202ENST00000575694 574 ntBASIC17.84■□□□□ 0.45
NDE1Q9NXR1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 REXO1L9P-201ENST00000604264 2108 ntBASIC17.84■□□□□ 0.45
NDE1Q9NXR1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NDE1Q9NXR1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDE1Q9NXR1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDE1Q9NXR1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NDE1Q9NXR1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDE1Q9NXR1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDE1Q9NXR1 KRT8P32-201ENST00000512863 1461 ntBASIC17.83■□□□□ 0.45
NDE1Q9NXR1 AC008556.1-201ENST00000610908 2040 ntBASIC17.83■□□□□ 0.45
NDE1Q9NXR1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 MIR638-201ENST00000385237 100 ntBASIC17.83■□□□□ 0.44
NDE1Q9NXR1 AC006015.1-201ENST00000429970 570 ntBASIC17.83■□□□□ 0.44
NDE1Q9NXR1 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.83■□□□□ 0.44
NDE1Q9NXR1 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.83■□□□□ 0.44
NDE1Q9NXR1 AL121829.2-201ENST00000620908 328 ntBASIC17.83■□□□□ 0.44
NDE1Q9NXR1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.83■□□□□ 0.44
NDE1Q9NXR1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 NKILA-202ENST00000614771 2598 ntBASIC17.82■□□□□ 0.44
NDE1Q9NXR1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDE1Q9NXR1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDE1Q9NXR1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms