Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THUMPD1Q9NXG2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 MIR564-202ENST00000385049 94 ntBASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 FAM197Y1-201ENST00000421178 764 ntBASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 MCCD1P1-208ENST00000445732 328 ntBASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THUMPD1Q9NXG2 AC135776.1-201ENST00000319817 2481 ntBASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
THUMPD1Q9NXG2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 OR6D1P-202ENST00000641007 5290 ntBASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 AC008556.1-201ENST00000610908 2040 ntBASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
THUMPD1Q9NXG2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 AC034236.2-201ENST00000606662 1610 ntBASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 NUDT16P1-203ENST00000513809 620 ntBASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.32■□□□□ 0.36
THUMPD1Q9NXG2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms