Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RBM28Q9NW13 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 AC079602.3-201ENST00000623931 403 ntBASIC21.34■■□□□ 1.01
RBM28Q9NW13 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 AL162741.1-201ENST00000565563 1558 ntBASIC21.34■■□□□ 1.01
RBM28Q9NW13 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.34■■□□□ 1.01
RBM28Q9NW13 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBM28Q9NW13 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
RBM28Q9NW13 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RBM28Q9NW13 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.33■■□□□ 1.01
RBM28Q9NW13 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 AL049597.2-201ENST00000565575 961 ntBASIC21.33■■□□□ 1.01
RBM28Q9NW13 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.33■■□□□ 1.01
RBM28Q9NW13 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.33■■□□□ 1.01
RBM28Q9NW13 AL136038.4-201ENST00000603606 1261 ntBASIC21.33■■□□□ 1.01
RBM28Q9NW13 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBM28Q9NW13 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RBM28Q9NW13 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RBM28Q9NW13 AC104581.1-202ENST00000635932 2618 ntBASIC21.33■■□□□ 1
RBM28Q9NW13 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.33■■□□□ 1
RBM28Q9NW13 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.33■■□□□ 1
RBM28Q9NW13 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.33■■□□□ 1
RBM28Q9NW13 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RBM28Q9NW13 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RBM28Q9NW13 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RBM28Q9NW13 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RBM28Q9NW13 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.32■■□□□ 1
RBM28Q9NW13 AL391807.1-203ENST00000604392 2365 ntBASIC21.32■■□□□ 1
RBM28Q9NW13 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.32■■□□□ 1
RBM28Q9NW13 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.32■■□□□ 1
RBM28Q9NW13 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.32■■□□□ 1
RBM28Q9NW13 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 AC112907.2-201ENST00000448639 330 ntBASIC21.32■■□□□ 1
RBM28Q9NW13 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.32■■□□□ 1
RBM28Q9NW13 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.32■■□□□ 1
RBM28Q9NW13 AC099343.3-201ENST00000605834 2503 ntBASIC21.32■■□□□ 1
RBM28Q9NW13 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.32■■□□□ 1
RBM28Q9NW13 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RBM28Q9NW13 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RBM28Q9NW13 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.32■■□□□ 1
RBM28Q9NW13 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.32■■□□□ 1
RBM28Q9NW13 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RBM28Q9NW13 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.32■■□□□ 1
RBM28Q9NW13 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RBM28Q9NW13 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.31■■□□□ 1
RBM28Q9NW13 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.31■■□□□ 1
RBM28Q9NW13 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RBM28Q9NW13 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RBM28Q9NW13 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RBM28Q9NW13 AL024508.2-201ENST00000607749 1894 ntBASIC21.31■■□□□ 1
RBM28Q9NW13 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RBM28Q9NW13 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
RBM28Q9NW13 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RBM28Q9NW13 HLA-F-220ENST00000434407 884 ntBASIC21.31■■□□□ 1
RBM28Q9NW13 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.31■■□□□ 1
RBM28Q9NW13 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.31■■□□□ 1
RBM28Q9NW13 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.31■■□□□ 1
RBM28Q9NW13 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.31■■□□□ 1
RBM28Q9NW13 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms