Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 AL359075.1-203ENST00000462729 1002 ntBASIC19.62■□□□□ 0.73
CISHQ9NSE2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 ESPNP-201ENST00000270691 2015 ntBASIC19.62■□□□□ 0.73
CISHQ9NSE2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 NEFHP1-201ENST00000412845 2629 ntBASIC19.62■□□□□ 0.73
CISHQ9NSE2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.62■□□□□ 0.73
CISHQ9NSE2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CISHQ9NSE2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 PVRIG2P-201ENST00000435460 978 ntBASIC19.61■□□□□ 0.73
CISHQ9NSE2 AC092647.4-201ENST00000457211 535 ntBASIC19.61■□□□□ 0.73
CISHQ9NSE2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 AC022616.7-201ENST00000525383 220 ntBASIC19.61■□□□□ 0.73
CISHQ9NSE2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 AC079602.3-201ENST00000623931 403 ntBASIC19.61■□□□□ 0.73
CISHQ9NSE2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.61■□□□□ 0.73
CISHQ9NSE2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CISHQ9NSE2 GMCL1P1-201ENST00000463439 1581 ntBASIC19.61■□□□□ 0.73
CISHQ9NSE2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CISHQ9NSE2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CISHQ9NSE2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CISHQ9NSE2 AC020763.4-201ENST00000623414 4170 ntBASIC19.6■□□□□ 0.73
CISHQ9NSE2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CISHQ9NSE2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CISHQ9NSE2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 FAM8A6P-201ENST00000407496 1135 ntBASIC19.6■□□□□ 0.73
CISHQ9NSE2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CISHQ9NSE2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CISHQ9NSE2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms