Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.39■□□□□ 0.38
PRDM9Q9NQV7 AC026471.1-201ENST00000564629 3026 ntBASIC17.39■□□□□ 0.38
PRDM9Q9NQV7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRDM9Q9NQV7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
PRDM9Q9NQV7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRDM9Q9NQV7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 AC009102.3-201ENST00000623118 1491 ntBASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 RASA4DP-201ENST00000460726 1199 ntBASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 MIR3917-201ENST00000580971 93 ntBASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.39■□□□□ 0.37
PRDM9Q9NQV7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SERPINA7P1-201ENST00000443077 631 ntBASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.38■□□□□ 0.37
PRDM9Q9NQV7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 SPDYE15P-201ENST00000424157 909 ntBASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 KRT18P38-201ENST00000449496 1282 ntBASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 KRT18P35-201ENST00000510488 1269 ntBASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRDM9Q9NQV7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms