Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 KRT18P41-201ENST00000518924 1277 ntBASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.93■□□□□ 0.3
KRCC1Q9NPI7 AL133373.2-201ENST00000623187 2828 ntBASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 AC073195.1-201ENST00000607241 877 ntBASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 AC135776.1-201ENST00000319817 2481 ntBASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRCC1Q9NPI7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 AC006058.3-201ENST00000606217 1069 ntBASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 AC073648.6-201ENST00000641589 218 ntBASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 AC008556.1-201ENST00000610908 2040 ntBASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRCC1Q9NPI7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 AC005332.8-201ENST00000622750 2735 ntBASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRCC1Q9NPI7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms