Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX2Q9NPC8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 MIR3180-4-201ENST00000582223 153 ntBASIC19.75■□□□□ 0.75
SIX2Q9NPC8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 FLJ13224-201ENST00000313737 1514 ntBASIC19.75■□□□□ 0.75
SIX2Q9NPC8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX2Q9NPC8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 AC093010.1-201ENST00000473625 1624 ntBASIC19.74■□□□□ 0.75
SIX2Q9NPC8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 HMGA1P5-201ENST00000412453 271 ntBASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 AC024243.1-201ENST00000609234 778 ntBASIC19.74■□□□□ 0.75
SIX2Q9NPC8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX2Q9NPC8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.73■□□□□ 0.75
SIX2Q9NPC8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SIX2Q9NPC8 AP000997.3-201ENST00000623333 2250 ntBASIC19.73■□□□□ 0.75
SIX2Q9NPC8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms