Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SCAF1Q9H7N4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SCAF1Q9H7N4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SCAF1Q9H7N4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 HLA-G-202ENST00000376815 851 ntBASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 TSSC2-201ENST00000450217 709 ntBASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC27.39■■□□□ 1.97
SCAF1Q9H7N4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 PMS2P1-201ENST00000431037 1228 ntBASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCAF1Q9H7N4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 LINC01465-201ENST00000408887 1940 ntBASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 AC103798.2-201ENST00000624292 632 ntBASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCAF1Q9H7N4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 AC022898.2-201ENST00000616822 1312 ntBASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 SEC63P1-201ENST00000425785 1258 ntBASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC27.36■■□□□ 1.97
SCAF1Q9H7N4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 AL354751.1-201ENST00000412768 1863 ntBASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 AL645929.1-201ENST00000420084 975 ntBASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 AL590627.1-203ENST00000421194 1026 ntBASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 AP002469.2-201ENST00000531724 424 ntBASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCAF1Q9H7N4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms