Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.62■□□□□ 0.41
PIF1Q9H611 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.62■□□□□ 0.41
PIF1Q9H611 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PIF1Q9H611 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PIF1Q9H611 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.61■□□□□ 0.41
PIF1Q9H611 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.61■□□□□ 0.41
PIF1Q9H611 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
PIF1Q9H611 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PIF1Q9H611 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.61■□□□□ 0.41
PIF1Q9H611 ESRRAP1-201ENST00000400596 1257 ntBASIC17.61■□□□□ 0.41
PIF1Q9H611 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 Z85996.1-201ENST00000494644 937 ntBASIC17.61■□□□□ 0.41
PIF1Q9H611 LINC00896-202ENST00000609602 2128 ntBASIC17.61■□□□□ 0.41
PIF1Q9H611 KRT8P32-201ENST00000512863 1461 ntBASIC17.61■□□□□ 0.41
PIF1Q9H611 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.61■□□□□ 0.41
PIF1Q9H611 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.61■□□□□ 0.41
PIF1Q9H611 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PIF1Q9H611 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PIF1Q9H611 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.6■□□□□ 0.41
PIF1Q9H611 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.6■□□□□ 0.41
PIF1Q9H611 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.6■□□□□ 0.41
PIF1Q9H611 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 POU5F1P3-201ENST00000428824 1078 ntBASIC17.6■□□□□ 0.41
PIF1Q9H611 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.6■□□□□ 0.41
PIF1Q9H611 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PIF1Q9H611 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.6■□□□□ 0.41
PIF1Q9H611 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.6■□□□□ 0.41
PIF1Q9H611 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PIF1Q9H611 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PIF1Q9H611 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.59■□□□□ 0.41
PIF1Q9H611 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.59■□□□□ 0.41
PIF1Q9H611 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.59■□□□□ 0.41
PIF1Q9H611 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PIF1Q9H611 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.59■□□□□ 0.41
PIF1Q9H611 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.59■□□□□ 0.41
PIF1Q9H611 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.59■□□□□ 0.41
PIF1Q9H611 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PIF1Q9H611 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PIF1Q9H611 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
PIF1Q9H611 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PIF1Q9H611 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PIF1Q9H611 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PIF1Q9H611 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.58■□□□□ 0.41
PIF1Q9H611 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 AC099343.3-201ENST00000605834 2503 ntBASIC17.58■□□□□ 0.41
PIF1Q9H611 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.58■□□□□ 0.41
PIF1Q9H611 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PIF1Q9H611 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PIF1Q9H611 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms