Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS33BQ9H267 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS33BQ9H267 YBX2P1-201ENST00000394192 760 ntBASIC22.07■■□□□ 1.12
VPS33BQ9H267 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 KRT18P65-201ENST00000439811 1286 ntBASIC22.07■■□□□ 1.12
VPS33BQ9H267 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 AC105339.3-201ENST00000560043 636 ntBASIC22.07■■□□□ 1.12
VPS33BQ9H267 MIR3687-2-201ENST00000577708 61 ntBASIC22.07■■□□□ 1.12
VPS33BQ9H267 MIR3687-1-201ENST00000614492 61 ntBASIC22.07■■□□□ 1.12
VPS33BQ9H267 AC107918.4-202ENST00000641623 219 ntBASIC22.07■■□□□ 1.12
VPS33BQ9H267 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS33BQ9H267 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS33BQ9H267 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS33BQ9H267 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS33BQ9H267 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.06■■□□□ 1.12
VPS33BQ9H267 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.06■■□□□ 1.12
VPS33BQ9H267 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS33BQ9H267 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS33BQ9H267 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
VPS33BQ9H267 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS33BQ9H267 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.05■■□□□ 1.12
VPS33BQ9H267 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS33BQ9H267 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS33BQ9H267 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
VPS33BQ9H267 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.05■■□□□ 1.12
VPS33BQ9H267 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.05■■□□□ 1.12
VPS33BQ9H267 PMS2P2-201ENST00000425039 1128 ntBASIC22.05■■□□□ 1.12
VPS33BQ9H267 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.05■■□□□ 1.12
VPS33BQ9H267 AC112482.1-201ENST00000492080 688 ntBASIC22.05■■□□□ 1.12
VPS33BQ9H267 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
VPS33BQ9H267 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
VPS33BQ9H267 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 AC004832.2-201ENST00000426397 482 ntBASIC22.04■■□□□ 1.12
VPS33BQ9H267 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS33BQ9H267 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.04■■□□□ 1.12
VPS33BQ9H267 MYLKP1-201ENST00000509077 1580 ntBASIC22.04■■□□□ 1.12
VPS33BQ9H267 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 NKAPP1-205ENST00000585790 367 ntBASIC22.03■■□□□ 1.12
VPS33BQ9H267 MTDHP4-201ENST00000600287 670 ntBASIC22.03■■□□□ 1.12
VPS33BQ9H267 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 AP000867.4-201ENST00000641616 219 ntBASIC22.03■■□□□ 1.12
VPS33BQ9H267 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
VPS33BQ9H267 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS33BQ9H267 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 718.9 ms