Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AL365203.3-201ENST00000609742 2057 ntBASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AC055733.4-201ENST00000638462 1354 ntBASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AL034346.1-201ENST00000568244 1277 ntBASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CYSTM1Q9H1C7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 AC006116.8-202ENST00000587620 1550 ntBASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 AC004448.1-201ENST00000458332 883 ntBASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 AC005224.4-201ENST00000583262 1652 ntBASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.66□□□□□ -0.7
CYSTM1Q9H1C7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms