Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.51■□□□□ 0.55
CLPBQ9H078 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPBQ9H078 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPBQ9H078 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPBQ9H078 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPBQ9H078 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPBQ9H078 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPBQ9H078 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPBQ9H078 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLPBQ9H078 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPBQ9H078 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLPBQ9H078 AC005332.1-201ENST00000577698 1310 ntBASIC18.5■□□□□ 0.55
CLPBQ9H078 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLPBQ9H078 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPBQ9H078 STARP1-201ENST00000397973 869 ntBASIC18.5■□□□□ 0.55
CLPBQ9H078 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.5■□□□□ 0.55
CLPBQ9H078 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLPBQ9H078 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
CLPBQ9H078 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPBQ9H078 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLPBQ9H078 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLPBQ9H078 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CLPBQ9H078 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 SPDYE15P-201ENST00000424157 909 ntBASIC18.49■□□□□ 0.55
CLPBQ9H078 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.49■□□□□ 0.55
CLPBQ9H078 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CLPBQ9H078 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 MIR3180-5-201ENST00000583743 153 ntBASIC18.49■□□□□ 0.55
CLPBQ9H078 AC083849.1-201ENST00000615227 514 ntBASIC18.49■□□□□ 0.55
CLPBQ9H078 IER3-202ENST00000376377 1350 ntBASIC18.49■□□□□ 0.55
CLPBQ9H078 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPBQ9H078 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPBQ9H078 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CLPBQ9H078 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 HTR7P1-202ENST00000624664 4411 ntBASIC18.48■□□□□ 0.55
CLPBQ9H078 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CLPBQ9H078 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.48■□□□□ 0.55
CLPBQ9H078 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.48■□□□□ 0.55
CLPBQ9H078 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 MIR564-202ENST00000385049 94 ntBASIC18.48■□□□□ 0.55
CLPBQ9H078 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.48■□□□□ 0.55
CLPBQ9H078 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CLPBQ9H078 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.48■□□□□ 0.55
CLPBQ9H078 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.48■□□□□ 0.55
CLPBQ9H078 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CLPBQ9H078 AC116407.4-201ENST00000623319 1061 ntBASIC18.48■□□□□ 0.55
CLPBQ9H078 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CLPBQ9H078 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CLPBQ9H078 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.48■□□□□ 0.55
CLPBQ9H078 AC112777.1-201ENST00000540175 1423 ntBASIC18.48■□□□□ 0.55
CLPBQ9H078 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPBQ9H078 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms