Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 AP002414.4-201ENST00000589764 1148 ntBASIC18.82■□□□□ 0.6
CIPCQ9C0C6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CIPCQ9C0C6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.81■□□□□ 0.6
CIPCQ9C0C6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 MIR3652-201ENST00000579335 131 ntBASIC18.81■□□□□ 0.6
CIPCQ9C0C6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CIPCQ9C0C6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 KRT18P1-202ENST00000452408 1331 ntBASIC18.8■□□□□ 0.6
CIPCQ9C0C6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 AL450487.1-201ENST00000426799 995 ntBASIC18.8■□□□□ 0.6
CIPCQ9C0C6 AP002383.4-201ENST00000442518 975 ntBASIC18.8■□□□□ 0.6
CIPCQ9C0C6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 AL121894.2-201ENST00000602977 491 ntBASIC18.8■□□□□ 0.6
CIPCQ9C0C6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
CIPCQ9C0C6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 PRELID1P1-202ENST00000567272 903 ntBASIC18.79■□□□□ 0.6
CIPCQ9C0C6 AC005332.3-201ENST00000589904 676 ntBASIC18.79■□□□□ 0.6
CIPCQ9C0C6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 AC099343.3-201ENST00000605834 2503 ntBASIC18.79■□□□□ 0.6
CIPCQ9C0C6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CIPCQ9C0C6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms