Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXP3Q9BZS1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FOXP3Q9BZS1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FOXP3Q9BZS1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
FOXP3Q9BZS1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXP3Q9BZS1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 AC131212.4-201ENST00000623606 975 ntBASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 LINC01568-207ENST00000641790 1380 ntBASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 CYP2D8P-201ENST00000433633 1490 ntBASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 MYLKP1-201ENST00000509077 1580 ntBASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
FOXP3Q9BZS1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 FLJ13224-201ENST00000313737 1514 ntBASIC19■□□□□ 0.63
FOXP3Q9BZS1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC005521.1-201ENST00000393351 872 ntBASIC19■□□□□ 0.63
FOXP3Q9BZS1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 KRT18P35-201ENST00000510488 1269 ntBASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC092865.7-201ENST00000641832 219 ntBASIC19■□□□□ 0.63
FOXP3Q9BZS1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms