Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 AL109659.2-201ENST00000606809 1674 ntBASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 AC124067.4-201ENST00000519691 2379 ntBASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
KRTAP3-1Q9BYR8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 GMCL1P1-201ENST00000463439 1581 ntBASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 KRT16P5-201ENST00000455284 522 ntBASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AL133445.2-201ENST00000611191 527 ntBASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AC131212.4-201ENST00000623606 975 ntBASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 ABBA01031674.1-201ENST00000635145 728 ntBASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AC040160.2-201ENST00000623816 1675 ntBASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC9.34□□□□□ -0.91
KRTAP3-1Q9BYR8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
KRTAP3-1Q9BYR8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.92
KRTAP3-1Q9BYR8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
KRTAP3-1Q9BYR8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
KRTAP3-1Q9BYR8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms