Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VRK1Q99986 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
VRK1Q99986 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
VRK1Q99986 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VRK1Q99986 AK4P3-201ENST00000418260 669 ntBASIC16.26■□□□□ 0.19
VRK1Q99986 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.26■□□□□ 0.19
VRK1Q99986 BX664615.1-201ENST00000443558 458 ntBASIC16.26■□□□□ 0.19
VRK1Q99986 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 PRSS44-201ENST00000515154 1146 ntBASIC16.26■□□□□ 0.19
VRK1Q99986 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.26■□□□□ 0.19
VRK1Q99986 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.26■□□□□ 0.19
VRK1Q99986 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VRK1Q99986 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 KRT8P11-201ENST00000409686 1436 ntBASIC16.26■□□□□ 0.19
VRK1Q99986 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK1Q99986 AC104417.2-201ENST00000562989 1793 ntBASIC16.26■□□□□ 0.19
VRK1Q99986 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK1Q99986 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.25■□□□□ 0.19
VRK1Q99986 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VRK1Q99986 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
VRK1Q99986 CA15P1-201ENST00000481698 905 ntBASIC16.25■□□□□ 0.19
VRK1Q99986 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.25■□□□□ 0.19
VRK1Q99986 AL353719.1-201ENST00000566847 864 ntBASIC16.25■□□□□ 0.19
VRK1Q99986 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.25■□□□□ 0.19
VRK1Q99986 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
VRK1Q99986 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.25■□□□□ 0.19
VRK1Q99986 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 AC092338.2-201ENST00000568827 1415 ntBASIC16.25■□□□□ 0.19
VRK1Q99986 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK1Q99986 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VRK1Q99986 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.25■□□□□ 0.19
VRK1Q99986 AC068880.1-201ENST00000507289 2297 ntBASIC16.25■□□□□ 0.19
VRK1Q99986 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.25■□□□□ 0.19
VRK1Q99986 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.25■□□□□ 0.19
VRK1Q99986 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VRK1Q99986 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VRK1Q99986 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 PKD1P1-201ENST00000458669 6805 ntBASIC16.24■□□□□ 0.19
VRK1Q99986 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VRK1Q99986 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.24■□□□□ 0.19
VRK1Q99986 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VRK1Q99986 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms