Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 LINC01126-201ENST00000623515 1646 ntBASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB18PQ96TA0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB18PQ96TA0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHB18PQ96TA0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHB18PQ96TA0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHB18PQ96TA0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 AC138028.4-201ENST00000564984 1845 ntBASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 AC009947.2-201ENST00000444014 672 ntBASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 AC128688.1-201ENST00000487626 519 ntBASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB18PQ96TA0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 SEC1P-202ENST00000473944 940 ntBASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB18PQ96TA0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB18PQ96TA0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms