Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 KRT18P56-201ENST00000507275 550 ntBASIC14.33□□□□□ -0.12
DUX3Q96PT4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 AC079602.3-201ENST00000623931 403 ntBASIC14.33□□□□□ -0.12
DUX3Q96PT4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 MIR564-202ENST00000385049 94 ntBASIC14.32□□□□□ -0.12
DUX3Q96PT4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AL645929.1-201ENST00000420084 975 ntBASIC14.32□□□□□ -0.12
DUX3Q96PT4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AC069148.1-201ENST00000608741 768 ntBASIC14.32□□□□□ -0.12
DUX3Q96PT4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AC006333.2-201ENST00000607957 2099 ntBASIC14.32□□□□□ -0.12
DUX3Q96PT4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DUX3Q96PT4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DUX3Q96PT4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 HCG4P8-203ENST00000443049 980 ntBASIC14.31□□□□□ -0.12
DUX3Q96PT4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
DUX3Q96PT4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DUX3Q96PT4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DUX3Q96PT4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.3□□□□□ -0.12
DUX3Q96PT4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DUX3Q96PT4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DUX3Q96PT4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
DUX3Q96PT4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms