Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP1S3Q96PC3 AL512353.2-201ENST00000448759 1962 ntBASIC13.92□□□□□ -0.18
AP1S3Q96PC3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 AL512625.2-201ENST00000417533 625 ntBASIC13.92□□□□□ -0.18
AP1S3Q96PC3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
AP1S3Q96PC3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 AC104417.2-201ENST00000562989 1793 ntBASIC13.91□□□□□ -0.18
AP1S3Q96PC3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 AC073210.2-201ENST00000430369 194 ntBASIC13.91□□□□□ -0.18
AP1S3Q96PC3 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 SDHAP1-207ENST00000440850 2000 ntBASIC13.91□□□□□ -0.18
AP1S3Q96PC3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 AL161772.1-201ENST00000610494 4412 ntBASIC13.91□□□□□ -0.18
AP1S3Q96PC3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.91□□□□□ -0.18
AP1S3Q96PC3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S3Q96PC3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.9□□□□□ -0.18
AP1S3Q96PC3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S3Q96PC3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms