Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC46A1Q96NT5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC46A1Q96NT5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC46A1Q96NT5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC46A1Q96NT5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 SAPCD2P3-201ENST00000455031 850 ntBASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 RN7SL606P-201ENST00000472779 293 ntBASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 AL671883.3-201ENST00000603274 991 ntBASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 REXO1L6P-202ENST00000619970 1078 ntBASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC46A1Q96NT5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC46A1Q96NT5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 AKR1C7P-201ENST00000305623 895 ntBASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 AL592071.1-201ENST00000611956 408 ntBASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A1Q96NT5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 VENTXP7-201ENST00000475503 772 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms