Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 AC132008.2-207ENST00000454517 770 ntBASIC19.53■□□□□ 0.72
ZNF558Q96NG5 RNA5SP419-201ENST00000515908 135 ntBASIC19.53■□□□□ 0.72
ZNF558Q96NG5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 AC008608.2-201ENST00000606089 416 ntBASIC19.53■□□□□ 0.72
ZNF558Q96NG5 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 IL9RP2-201ENST00000423948 1312 ntBASIC19.52■□□□□ 0.72
ZNF558Q96NG5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 AL031284.1-201ENST00000419297 478 ntBASIC19.52■□□□□ 0.72
ZNF558Q96NG5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF558Q96NG5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF558Q96NG5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF558Q96NG5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 PMS2P1-201ENST00000431037 1228 ntBASIC19.51■□□□□ 0.71
ZNF558Q96NG5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 AL671883.3-201ENST00000603274 991 ntBASIC19.51■□□□□ 0.71
ZNF558Q96NG5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.51■□□□□ 0.71
ZNF558Q96NG5 AF228730.7-201ENST00000641842 219 ntBASIC19.51■□□□□ 0.71
ZNF558Q96NG5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 AL161938.1-201ENST00000569833 2180 ntBASIC19.51■□□□□ 0.71
ZNF558Q96NG5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
ZNF558Q96NG5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 RCN1P2-201ENST00000398357 915 ntBASIC19.5■□□□□ 0.71
ZNF558Q96NG5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 AC093909.1-201ENST00000504731 1122 ntBASIC19.5■□□□□ 0.71
ZNF558Q96NG5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 AC005336.2-201ENST00000593183 939 ntBASIC19.5■□□□□ 0.71
ZNF558Q96NG5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF558Q96NG5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 TP73-AS1-210ENST00000637775 1455 ntBASIC19.49■□□□□ 0.71
ZNF558Q96NG5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms