Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 NIFKP9-201ENST00000419265 221 ntBASIC17.72■□□□□ 0.43
VPS33AQ96AX1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 AC124016.1-201ENST00000609552 612 ntBASIC17.72■□□□□ 0.43
VPS33AQ96AX1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS33AQ96AX1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 MYLKP1-201ENST00000509077 1580 ntBASIC17.71■□□□□ 0.43
VPS33AQ96AX1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 RPS2P4-201ENST00000476944 856 ntBASIC17.71■□□□□ 0.43
VPS33AQ96AX1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.71■□□□□ 0.43
VPS33AQ96AX1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS33AQ96AX1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
VPS33AQ96AX1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.71■□□□□ 0.42
VPS33AQ96AX1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VPS33AQ96AX1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 GNAS-203ENST00000306120 1878 ntBASIC17.7■□□□□ 0.42
VPS33AQ96AX1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 HTR7P1-201ENST00000538670 1336 ntBASIC17.7■□□□□ 0.42
VPS33AQ96AX1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VPS33AQ96AX1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms