Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE4Q96A23 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE4Q96A23 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE4Q96A23 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CPNE4Q96A23 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE4Q96A23 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE4Q96A23 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE4Q96A23 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE4Q96A23 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 AL163051.1-201ENST00000569214 1512 ntBASIC16.52■□□□□ 0.24
CPNE4Q96A23 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 AL671277.2-201ENST00000458060 996 ntBASIC16.52■□□□□ 0.24
CPNE4Q96A23 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 KRT18P35-201ENST00000510488 1269 ntBASIC16.52■□□□□ 0.24
CPNE4Q96A23 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE4Q96A23 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.52■□□□□ 0.24
CPNE4Q96A23 AL157888.1-201ENST00000631930 593 ntBASIC16.52■□□□□ 0.24
CPNE4Q96A23 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE4Q96A23 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CPNE4Q96A23 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE4Q96A23 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE4Q96A23 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CPNE4Q96A23 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE4Q96A23 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CPNE4Q96A23 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE4Q96A23 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE4Q96A23 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE4Q96A23 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 KRT18P38-201ENST00000449496 1282 ntBASIC16.51■□□□□ 0.23
CPNE4Q96A23 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 AL445228.2-201ENST00000605589 952 ntBASIC16.51■□□□□ 0.23
CPNE4Q96A23 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 TNXA-203ENST00000507684 2038 ntBASIC16.51■□□□□ 0.23
CPNE4Q96A23 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE4Q96A23 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE4Q96A23 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE4Q96A23 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 MIR149-201ENST00000384879 89 ntBASIC16.5■□□□□ 0.23
CPNE4Q96A23 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE4Q96A23 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms