Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 FAM207BP-201ENST00000447172 505 ntBASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC008040.2-201ENST00000461049 708 ntBASIC14.56□□□□□ -0.08
NPIPB3Q92617 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 C1QBPP2-201ENST00000528754 825 ntBASIC14.56□□□□□ -0.08
NPIPB3Q92617 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC130371.2-201ENST00000619443 611 ntBASIC14.56□□□□□ -0.08
NPIPB3Q92617 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC008556.1-201ENST00000610908 2040 ntBASIC14.56□□□□□ -0.08
NPIPB3Q92617 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPB3Q92617 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPB3Q92617 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.55□□□□□ -0.08
NPIPB3Q92617 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 AC026271.3-201ENST00000571884 352 ntBASIC14.55□□□□□ -0.08
NPIPB3Q92617 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPB3Q92617 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPB3Q92617 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 ESPNP-201ENST00000270691 2015 ntBASIC14.54□□□□□ -0.08
NPIPB3Q92617 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 AP000997.3-201ENST00000623333 2250 ntBASIC14.54□□□□□ -0.08
NPIPB3Q92617 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 AC128676.1-201ENST00000454392 318 ntBASIC14.54□□□□□ -0.08
NPIPB3Q92617 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 AC073195.1-201ENST00000607241 877 ntBASIC14.54□□□□□ -0.08
NPIPB3Q92617 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPB3Q92617 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPB3Q92617 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms