Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP000692.2-201ENST00000608391 879 ntBASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 MCCD1P1-208ENST00000445732 328 ntBASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC44A1Q8WWI5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC44A1Q8WWI5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.46■□□□□ 0.54
SLC44A1Q8WWI5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 MIR4651-201ENST00000582622 73 ntBASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 AC006058.3-201ENST00000606217 1069 ntBASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC44A1Q8WWI5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 RARRES2P10-201ENST00000564312 460 ntBASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 AC139713.2-201ENST00000641328 2723 ntBASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC44A1Q8WWI5 AC096733.2-201ENST00000609937 1394 ntBASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 AC006116.8-202ENST00000587620 1550 ntBASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC44A1Q8WWI5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms