Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 DRAXINP1-201ENST00000437611 948 ntBASIC31.48■■■□□ 2.63
TRIM41Q8WV44 DNAJB3-202ENST00000449667 1266 ntBASIC31.48■■■□□ 2.63
TRIM41Q8WV44 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 AF238378.1-201ENST00000526806 358 ntBASIC31.48■■■□□ 2.63
TRIM41Q8WV44 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 PRR29-209ENST00000582540 967 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM41Q8WV44 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 FAM197Y8-203ENST00000450145 560 ntBASIC31.47■■■□□ 2.63
TRIM41Q8WV44 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 MIR1199-201ENST00000621445 119 ntBASIC31.47■■■□□ 2.63
TRIM41Q8WV44 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM41Q8WV44 AC034236.2-201ENST00000606662 1610 ntBASIC31.46■■■□□ 2.63
TRIM41Q8WV44 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 SAPCD2P3-201ENST00000455031 850 ntBASIC31.46■■■□□ 2.63
TRIM41Q8WV44 AL157888.1-201ENST00000631930 593 ntBASIC31.46■■■□□ 2.63
TRIM41Q8WV44 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM41Q8WV44 Z98044.1-201ENST00000632503 1764 ntBASIC31.45■■■□□ 2.63
TRIM41Q8WV44 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 AC034232.1-201ENST00000506026 1064 ntBASIC31.45■■■□□ 2.63
TRIM41Q8WV44 KRT8P7-201ENST00000533003 1432 ntBASIC31.45■■■□□ 2.63
TRIM41Q8WV44 ABR-204ENST00000543210 1049 ntTSL 2 BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC31.45■■■□□ 2.63
TRIM41Q8WV44 AC104390.1-201ENST00000555663 520 ntBASIC31.45■■■□□ 2.63
TRIM41Q8WV44 AC148477.8-201ENST00000624298 468 ntBASIC31.45■■■□□ 2.63
TRIM41Q8WV44 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
TRIM41Q8WV44 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC31.45■■■□□ 2.62
TRIM41Q8WV44 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
TRIM41Q8WV44 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TRIM41Q8WV44 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
TRIM41Q8WV44 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 IGHV3-22-201ENST00000520721 359 ntBASIC31.44■■■□□ 2.62
TRIM41Q8WV44 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 AC009065.1-201ENST00000564055 1225 ntBASIC31.44■■■□□ 2.62
TRIM41Q8WV44 MIR3687-2-201ENST00000577708 61 ntBASIC31.44■■■□□ 2.62
TRIM41Q8WV44 MIR3917-201ENST00000580971 93 ntBASIC31.44■■■□□ 2.62
TRIM41Q8WV44 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 MIR3687-1-201ENST00000614492 61 ntBASIC31.44■■■□□ 2.62
TRIM41Q8WV44 AC079602.3-201ENST00000623931 403 ntBASIC31.44■■■□□ 2.62
TRIM41Q8WV44 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC31.44■■■□□ 2.62
TRIM41Q8WV44 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 AC093909.1-201ENST00000504731 1122 ntBASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms