Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 AL499627.1-201ENST00000569373 2188 ntBASIC19.33■□□□□ 0.68
RNF139Q8WU17 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF139Q8WU17 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.32■□□□□ 0.68
RNF139Q8WU17 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF139Q8WU17 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF139Q8WU17 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 AL031133.1-201ENST00000406807 723 ntBASIC19.31■□□□□ 0.68
RNF139Q8WU17 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 LINC01311-201ENST00000565162 1445 ntBASIC19.31■□□□□ 0.68
RNF139Q8WU17 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF139Q8WU17 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF139Q8WU17 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF139Q8WU17 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF139Q8WU17 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF139Q8WU17 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF139Q8WU17 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF139Q8WU17 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF139Q8WU17 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 MYLKP1-201ENST00000509077 1580 ntBASIC19.29■□□□□ 0.68
RNF139Q8WU17 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF139Q8WU17 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF139Q8WU17 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms