Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL031133.1-201ENST00000406807 723 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 HMGA1P5-201ENST00000412453 271 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 AC009947.2-201ENST00000444014 672 ntBASIC16.25■□□□□ 0.19
RTTNQ86VV8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 AC008556.1-201ENST00000610908 2040 ntBASIC16.25■□□□□ 0.19
RTTNQ86VV8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.25■□□□□ 0.19
RTTNQ86VV8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTTNQ86VV8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 AC006538.3-201ENST00000612495 578 ntBASIC16.24■□□□□ 0.19
RTTNQ86VV8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.24■□□□□ 0.19
RTTNQ86VV8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTTNQ86VV8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 AL023284.2-201ENST00000405850 579 ntBASIC16.23■□□□□ 0.19
RTTNQ86VV8 AC063952.2-201ENST00000498792 1227 ntBASIC16.23■□□□□ 0.19
RTTNQ86VV8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 AC010653.2-201ENST00000623505 997 ntBASIC16.23■□□□□ 0.19
RTTNQ86VV8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms