Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI1Q7Z5J4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 MIR7706-201ENST00000613747 67 ntBASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI1Q7Z5J4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 AC018445.3-201ENST00000624177 1945 ntBASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 AP001005.1-201ENST00000571755 1248 ntBASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAI1Q7Z5J4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RAI1Q7Z5J4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AC018712.1-201ENST00000455767 687 ntBASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAI1Q7Z5J4 AL499627.1-201ENST00000569373 2188 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms